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STRINGSTRING
Mettu_1288 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1288" - annotation not available in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1288annotation not available (63 aa)    
Predicted Functional Partners:
Mettu_1287
PFAM- DegT/DnrJ/EryC1/StrS aminotransferase; KEGG- tsi-TSIB_2051 pyridoxal phosphate-dependent protein; Belongs to the DegT/DnrJ/EryC1 family (375 aa)
              0.845
Mettu_1286
PFAM- NAD-dependent epimerase/dehydratase; KEGG- wri-WRi_010400 NAD-dependent epimerase/dehydratase family protein (305 aa)
              0.845
Mettu_1289
PFAM- Methyltransferase type 11; KEGG- azc-AZC_3475 hypothetical protein (390 aa)
              0.505
Mettu_1290
PFAM- Phytanoyl-CoA dioxygenase; KEGG- pmf-P9303_23361 hypothetical protein (284 aa)
              0.408
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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