STRINGSTRING
Mettu_1296 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1296" - Radical SAM domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1296Radical SAM domain protein (464 aa)    
Predicted Functional Partners:
Mettu_0723
Uroporphyrinogen decarboxylase (URO-D) (342 aa)
   
   
    0.940
hemE
Uroporphyrinogen decarboxylase ; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (355 aa)
         
    0.900
Mettu_1299
Bifunctional protein HldE ; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose (506 aa)
 
          0.868
Mettu_1295
Putative uncharacterized protein (605 aa)
              0.834
Mettu_1301
UDP-glucose 4-epimerase (328 aa)
 
          0.798
Mettu_1302
Radical SAM domain protein (366 aa)
 
       
0.794
Mettu_1300
Phosphoheptose isomerase (187 aa)
              0.780
Mettu_1298
Pyruvate dehydrogenase (Acetyl-transferring) (358 aa)
              0.779
Mettu_1297
Pyruvate dehydrogenase (Acetyl-transferring) (356 aa)
              0.779
Mettu_3073
Sel1 domain protein repeat-containing protein (779 aa)
   
          0.558
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (10%) [HD]