STRINGSTRING
Mettu_1384 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1384" - Post-segregation antitoxin CcdA in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1384Post-segregation antitoxin CcdA (79 aa)    
Predicted Functional Partners:
Mettu_1385
CcdB-like toxin protein (90 aa)
 
          0.930
Mettu_2107
CcdB protein (104 aa)
 
          0.882
Mettu_2108
Post-segregation antitoxin CcdA (82 aa)
   
          0.778
Mettu_1383
Sel1 domain protein repeat-containing protein (152 aa)
 
          0.619
Mettu_3761
Glycosyl transferase family 39 (540 aa)
   
          0.559
Mettu_0123
Putative uncharacterized protein (528 aa)
   
          0.485
Mettu_3307
Putative uncharacterized protein (500 aa)
   
          0.431
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (8%) [HD]