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Mettu_1385 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1385" - CcdB-like toxin protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1385CcdB-like toxin protein (90 aa)    
Predicted Functional Partners:
Mettu_1384
Post-segregation antitoxin CcdA (79 aa)
 
          0.930
Mettu_2108
Post-segregation antitoxin CcdA (82 aa)
   
          0.778
Mettu_1383
Sel1 domain protein repeat-containing protein (152 aa)
 
          0.596
Mettu_0603
Transcriptional regulator, XRE family (94 aa)
   
          0.510
Mettu_0347
Putative uncharacterized protein (93 aa)
   
          0.466
Mettu_0294
Putative uncharacterized protein (464 aa)
   
          0.445
Mettu_0801
Addiction module toxin, RelE/StbE family (108 aa)
   
          0.442
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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