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STRINGSTRING
mrdB protein (Methylobacter tundripaludum) - STRING interaction network
"mrdB" - Peptidoglycan glycosyltransferase MrdB in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
mrdBPeptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily (377 aa)    
Predicted Functional Partners:
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily (612 aa)
  0.998
Mettu_1391
KEGG- mca-MCA0101 rod shape-determining protein MreC; TIGRFAM- Rod shape-determining protein MreC, subtype; PFAM- Rod shape-determining protein MreC (339 aa)
 
 
  0.984
Mettu_1390
KEGG- mca-MCA0100 rod shape-determining protein MreB; TIGRFAM- Cell shape determining protein MreB/Mrl; PFAM- Cell shape determining protein MreB/Mrl (347 aa)
 
  0.980
Mettu_0314
KEGG- sat-SYN_02082 membrane carboxypeptidase (1047 aa)
   
  0.970
ftsI
Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily (592 aa)
  0.947
Mettu_1392
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins (161 aa)
 
   
  0.946
Mettu_1397
Beta-lactamase; KEGG- mca-MCA0105 D-alanyl-D-alanine carboxypeptidase; PFAM- Peptidase S11, D-alanyl-D-alanine carboxypeptidase A; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; Belongs to the peptidase S11 family (389 aa)
 
  0.931
ftsQ
Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly (260 aa)
   
 
  0.849
mtgA
Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family (257 aa)
 
  0.849
Mettu_4362
Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) (780 aa)
 
  0.832
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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