• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_1413 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1413" - TrkA-N domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1413TrkA-N domain protein; PFAM- Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG- mca-MCA2849 potassium transporter peripheral membrane component (453 aa)    
Predicted Functional Partners:
Mettu_1412
Trk system potassium uptake protein; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA (485 aa)
 
 
  0.993
mscL
Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell (134 aa)
       
  0.858
Mettu_3769
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (435 aa)
   
        0.698
Mettu_0379
ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family (249 aa)
         
  0.651
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family (212 aa)
       
    0.638
Mettu_1415
Succinate--CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit (397 aa)
              0.586
Mettu_1414
Succinate--CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit (295 aa)
              0.586
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (176 aa)
         
  0.539
Mettu_1888
PFAM- Sulphate transporter; UspA; KEGG- bmd-BMD_2586 putative sulfate transport protein (permease activity); Belongs to the universal stress protein A family (771 aa)
         
  0.526
Mettu_4081
Aspartokinase; KEGG- mca-MCA0390 aspartate kinase; TIGRFAM- Aspartate kinase region; Aspartate kinase, monofunctional class; PFAM- Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Belongs to the aspartokinase family (408 aa)
       
  0.505
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]