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Mettu_1419 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1419" - KEGG: mmw:Mmwyl1_1536 RNP-1 like RNA-binding protein in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Mettu_1419KEGG- mmw-Mmwyl1_1536 RNP-1 like RNA-binding protein; PFAM- RNA recognition motif, RNP-1; SMART- RNA recognition motif, RNP-1 (86 aa)    
Predicted Functional Partners:
Mettu_3285
KEGG- nhl-Nhal_3499 RNP-1 like RNA-binding protein; PFAM- RNA recognition motif, RNP-1; SMART- RNA recognition motif, RNP-1 (88 aa)
   
          0.783
Mettu_4376
Phosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family (550 aa)
     
  0.780
Mettu_0730
KEGG- svo-SVI_3119 serine/threonine protein kinase; PFAM- Serine/threonine-protein kinase-like domain; Leucine-rich repeat; SMART- Serine/threonine-protein kinase domain; Tyrosine-protein kinase, subgroup, catalytic domain; Leucine-rich repeat, typical subtype (448 aa)
   
 
  0.747
Mettu_4048
PFAM- RNA-metabolising metallo-beta-lactamase; KEGG- pap-PSPA7_1526 hypothetical protein (466 aa)
     
  0.704
Mettu_3886
KEGG- ach-Achl_3909 hypothetical protein; PFAM- Fibronectin, type III; WD40 repeat, subgroup; SMART- Fibronectin, type III; WD40 repeat (3056 aa)
     
  0.683
Mettu_0421
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (193 aa)
     
  0.647
Mettu_1173
KEGG- pna-Pnap_4661 hypothetical protein (363 aa)
     
  0.626
Mettu_4189
TIGRFAM- RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM- Helicase-associated region; DNA/RNA helicase, C-terminal; Domain of unknown function DUF1605; KEGG- mca-MCA1482 ATP-dependent helicase HrpA; SMART- DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; DNA/RNA helicase, C-terminal (1315 aa)
     
  0.625
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (342 aa)
     
    0.622
rplB
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (275 aa)
     
    0.608
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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