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mdh protein (Methylobacter tundripaludum) - STRING interaction network
"mdh" - Malate dehydrogenase in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdhMalate dehydrogenase ; Catalyzes the reversible oxidation of malate to oxaloacetate (326 aa)    
Predicted Functional Partners:
Mettu_2509
Citrate synthase (432 aa)
   
  0.996
Mettu_3480
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
   
 
  0.994
fumC
Fumarate hydratase class II (467 aa)
   
  0.992
Mettu_0758
Glutamate synthase (Ferredoxin) (1539 aa)
   
 
  0.985
Mettu_2982
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (508 aa)
   
 
  0.984
Mettu_3447
Citrate synthase (434 aa)
   
  0.982
Mettu_1817
Succinyl-CoA synthetase subunit beta (388 aa)
   
  0.975
Mettu_1415
Succinyl-CoA synthetase subunit beta (397 aa)
   
  0.975
Mettu_1818
Succinyl-CoA ligase [ADP-forming] subunit alpha (288 aa)
   
 
  0.971
Mettu_1414
Succinyl-CoA ligase [ADP-forming] subunit alpha (295 aa)
   
 
  0.971
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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