STRINGSTRING
Mettu_1439 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1439" - UPF0313 protein Mettu_1439 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1439UPF0313 protein Mettu_1439 (721 aa)    
Predicted Functional Partners:
Mettu_1438
Spermine synthase (269 aa)
              0.859
rlmL
Ribosomal RNA large subunit methyltransferase K/L ; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA (774 aa)
     
   
  0.604
Mettu_1437
Putative uncharacterized protein (48 aa)
              0.600
Mettu_1391
Rod shape-determining protein MreC (339 aa)
   
        0.523
ubiA
4-HB polyprenyltransferase ; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate (289 aa)
         
  0.515
ubiG
3-demethylubiquinone 3-O-methyltransferase ; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway (239 aa)
         
  0.515
rimO
Ribosome maturation factor RimO ; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 (436 aa)
   
        0.511
Mettu_1390
Cell shape determining protein, MreB/Mrl family (347 aa)
   
        0.499
Mettu_4228
Glycosyl transferase family 2 (394 aa)
              0.493
rne
Ribonuclease E ; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs (819 aa)
              0.493
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (13%) [HD]