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STRINGSTRING
Mettu_1456 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1456" - PFAM: Condensation domain in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1456PFAM- Condensation domain; KEGG- lpp-lpp2571 hypothetical protein (437 aa)    
Predicted Functional Partners:
Mettu_1455
PFAM- AMP-dependent synthetase/ligase; KEGG- pub-SAR11_0422 putative long-chain-fatty-acid--CoA ligase (long-chain acyl-CoA synthetase) (533 aa)
   
 
  0.869
Mettu_1457
annotation not available (80 aa)
              0.845
Mettu_1458
PFAM- Secretion protein HlyD; KEGG- sde-Sde_3489 putative secretion protein (391 aa)
              0.792
Mettu_4281
PFAM- MbtH-like protein; KEGG- cyt-cce_3047 putative MbtH-like protein (73 aa)
   
  0.759
Mettu_3711
PFAM- MbtH-like protein; KEGG- sgr-SGR_452 putative MbtH-like protein (78 aa)
   
  0.759
Mettu_3704
PFAM- MbtH-like protein; KEGG- ami-Amir_3672 MbtH domain protein (195 aa)
   
  0.759
Mettu_4173
Unspecific monooxygenase; KEGG- nmu-Nmul_A2167 cytochrome P450; PFAM- Cytochrome P450 (451 aa)
   
  0.598
Mettu_4061
PFAM- Cytochrome P450; KEGG- xau-Xaut_0387 cytochrome P450 (442 aa)
   
  0.598
Mettu_1460
Pyridoxine 4-dehydrogenase; KEGG- azl-AZL_013980 aldo-keto reductase yakc; PFAM- Aldo/keto reductase (329 aa)
         
  0.579
Mettu_1459
Major facilitator superfamily MFS_1; KEGG- sde-Sde_3490 EmrB/QacA family drug resistance transporter; manually curated; PFAM- Major facilitator superfamily MFS-1 (513 aa)
              0.578
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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