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STRINGSTRING
Mettu_1473 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1473" - Transposase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1473Transposase; Manually curated; KEGG- amr-AM1_2664 hypothetical protein (356 aa)    
Predicted Functional Partners:
Mettu_0200
Transposase; Manually curated; KEGG- mar-MAE_11690 transposase (278 aa)
 
          0.527
EGW21441.1
Manually curated; KEGG- mar-MAE_11690 transposase (278 aa)
 
          0.527
Mettu_2714
PFAM- Plasmid pRiA4b ORF-3-like; KEGG- cyn-Cyan7425_4772 hypothetical protein (419 aa)
   
          0.527
Mettu_0872
Transposase; Manually curated; KEGG- mar-MAE_11690 transposase (278 aa)
 
          0.525
Mettu_1474
Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR (221 aa)
              0.516
Mettu_3570
PFAM- Protein of unknown function DUF820; KEGG- nhl-Nhal_0133 protein of unknown function DUF820 (197 aa)
   
          0.502
Mettu_2858
Transposase family protein; Manually curated; KEGG- app-CAP2UW1_1226 transposase family protein (401 aa)
   
          0.486
Mettu_4203
Uncharacterized protein; Manually curated; KEGG- ana-all1618 hypothetical protein (186 aa)
   
          0.484
Mettu_0483
PFAM- Protein of unknown function DUF820; KEGG- npu-Npun_F3673 hypothetical protein (215 aa)
   
          0.468
Mettu_0442
PFAM- Transposase, IS4-like; KEGG- pna-Pnap_4408 transposase, IS4 family protein (351 aa)
 
     
  0.465
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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