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Mettu_1504 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1504" - annotation not available in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1504annotation not available (30 aa)    
Predicted Functional Partners:
Mettu_1503
Two component transcriptional regulator PhoB, winged helix family; TIGRFAM- Signal transduction response regulator, phosphate regulon transcriptional regulatory protein phoB; PFAM- Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; KEGG- mca-MCA3105 DNA-binding response regulator PhoB; SMART- Signal transduction response regulator, receiver region (240 aa)
              0.645
Mettu_1502
Histidine kinase; TIGRFAM- Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG- mca-MCA3104 histidine protein kinase PhoR; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region (426 aa)
              0.645
Mettu_1506
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); TIGRFAM- Diguanylate cyclase, predicted; PAS; PFAM- Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain; GAF; PAS fold; KEGG- meh-M301_1461 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART- Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; HAMP linker domain; GAF; PAS; PAC motif (1017 aa)
              0.600
Mettu_1505
KEGG- slt-Slit_1659 phosphonate ABC transporter, periplasmic phosphonate-binding protein (350 aa)
              0.600
Mettu_1507
annotation not available (370 aa)
              0.422
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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