STRINGSTRING
Mettu_1538 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1538" - Transport permease protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1538Transport permease protein (250 aa)    
Predicted Functional Partners:
Mettu_1539
Polyamine-transporting ATPase (241 aa)
 
          0.935
Mettu_1541
Putative uncharacterized protein (468 aa)
              0.859
Mettu_1540
TonB-dependent receptor (682 aa)
              0.859
Mettu_1542
Radical SAM domain protein (463 aa)
              0.815
Mettu_0795
Phosphonate-transporting ATPase (314 aa)
   
          0.778
Mettu_0276
Polyamine-transporting ATPase (319 aa)
   
          0.767
Mettu_1543
Putative uncharacterized protein (35 aa)
              0.627
Mettu_1537
RNA polymerase sigma factor (167 aa)
              0.512
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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