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Mettu_1540 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1540" - PFAM: TonB-dependent receptor, beta-barrel in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1540PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- gur-Gura_0778 TonB-dependent receptor (682 aa)    
Predicted Functional Partners:
Mettu_1541
KEGG- bwe-BcerKBAB4_1749 hypothetical protein (468 aa)
 
          0.958
Mettu_1538
Transport permease protein; PFAM- ABC-2 type transporter; KEGG- hap-HAPS_0022 ABC-type multidrug transport system, permease component (250 aa)
 
          0.886
Mettu_1542
PFAM- Radical SAM; KEGG- toc-Toce_0938 radical SAM domain protein (463 aa)
 
          0.864
Mettu_1539
Polyamine-transporting ATPase; PFAM- ABC transporter-like; KEGG- tjr-TherJR_1446 ABC transporter related protein; SMART- ATPase, AAA+ type, core (241 aa)
              0.845
Mettu_2248
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (271 aa)
 
  0.720
Mettu_2378
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (266 aa)
   
  0.676
Mettu_2308
TonB family protein; KEGG- mca-MCA0441 TonB domain-containing protein; TIGRFAM- TonB, C-terminal; PFAM- Gram-negative bacterial tonB protein (259 aa)
   
  0.676
Mettu_1600
TonB family protein; TIGRFAM- TonB, C-terminal; KEGG- mca-MCA2337 TonB-dependent receptor, putative (292 aa)
   
  0.676
Mettu_0431
KEGG- meh-M301_2530 TonB family protein; TIGRFAM- TonB, C-terminal; PFAM- Gram-negative bacterial tonB protein (253 aa)
   
  0.676
Mettu_3913
KEGG- ank-AnaeK_0938 CAAX prenyl protease-related protein; TIGRFAM- Prenyl protease-related; PFAM- Exosortase EpsH-related; Abortive infection protein (557 aa)
   
          0.670
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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