• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_1545 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1545" - Phosphoheptose isomerase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1545Phosphoheptose isomerase; Manually curated; KEGG- mca-MCA0183 phosphoheptose isomerase (195 aa)    
Predicted Functional Partners:
hldE
Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose; In the N-terminal section; belongs to the carbohydrate kinase PfkB family (474 aa)
   
  0.984
Mettu_1299
Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose; In the N-terminal section; belongs to the carbohydrate kinase PfkB family (506 aa)
   
  0.968
Mettu_3948
KEGG- mca-MCA2051 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM- Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; PFAM- Haloacid dehalogenase-like hydrolase (183 aa)
 
  0.947
Mettu_1546
PFAM- Transport-associated; KEGG- nwa-Nwat_2750 transport-associated protein (190 aa)
   
        0.866
Mettu_1547
D-lactate dehydrogenase (Cytochrome); KEGG- mca-MCA0182 oxidoreductase, FAD-binding; PFAM- FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal (465 aa)
              0.861
Mettu_1859
Manually curated; TIGRFAM- Lipopolysaccharide heptosyltransferase III, putative; KEGG- bpd-BURPS668_1203 putative lipopolysaccharide heptosyltransferase III; PFAM- Glycosyl transferase, family 9 (367 aa)
 
  0.819
Mettu_1906
KEGG- ant-Arnit_2252 lipopolysaccharide heptosyltransferase I; TIGRFAM- Lipopolysaccharide heptosyltransferase I; PFAM- Glycosyl transferase, family 9 (334 aa)
 
  0.759
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (438 aa)
       
 
  0.732
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose (314 aa)
 
 
  0.714
Mettu_1907
KEGG- meh-M301_2012 lipopolysaccharide heptosyltransferase II; TIGRFAM- Lipopolysaccharide heptosyltransferase II; PFAM- Glycosyl transferase, family 9 (342 aa)
 
 
  0.709
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (7%) [HD]