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STRINGSTRING
Mettu_1558 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1558" - PFAM: Zinc/iron permease in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1558PFAM- Zinc/iron permease; KEGG- slt-Slit_2034 zinc/iron permease (274 aa)    
Predicted Functional Partners:
Mettu_1559
KEGG- dar-Daro_1605 hypothetical protein; TIGRFAM- Multi-copper polyphenol oxidoreductase, laccase; PFAM- Multi-copper polyphenol oxidoreductase, laccase (283 aa)
              0.870
Mettu_1560
Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (314 aa)
              0.866
bamD
Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane (279 aa)
              0.639
Mettu_3984
PFAM- Zinc/iron permease; KEGG- mca-MCA2417 ZIP zinc transporter family protein (316 aa)
   
   
    0.623
hisB
HAMAP- Imidazoleglycerol-phosphate dehydratase; KEGG- psa-PST_4090 imidazoleglycerol-phosphate dehydratase; PFAM- Imidazoleglycerol-phosphate dehydratase (208 aa)
 
            0.611
Mettu_3456
KEGG- slt-Slit_2143 major facilitator superfamily MFS_1 (408 aa)
   
      0.557
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) (214 aa)
 
   
    0.501
Mettu_2612
PFAM- Magnesium transporter, MgtE intracellular region; Mg2+ transporter protein, CorA-like; KEGG- slt-Slit_0480 Mg2 transporter protein CorA family protein (443 aa)
 
     
  0.453
Mettu_3840
PFAM- Major facilitator superfamily MFS-1; KEGG- mca-MCA2465 lysophospholipid transporter LplT (389 aa)
   
      0.410
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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