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Mettu_1563 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1563" - KEGG: abo:ABO_0491 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1563KEGG- abo-ABO_0491 hypothetical protein (268 aa)    
Predicted Functional Partners:
Mettu_1728
KEGG- rfr-Rfer_3396 TonB-dependent receptor; TIGRFAM- Bacterial TonB-dependent receptor; PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug (853 aa)
   
          0.731
Mettu_1565
KEGG- gca-Galf_1634 response regulator receiver protein; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region (151 aa)
              0.595
Mettu_1564
TIGRFAM- Diguanylate cyclase, predicted; PAS; PFAM- Diguanylate cyclase, predicted; PAS fold; Signal transduction response regulator, receiver region; KEGG- app-CAP2UW1_2559 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; SMART- Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS; PAC motif (426 aa)
              0.595
Mettu_1168
KEGG- rmr-Rmar_1225 hypothetical protein (426 aa)
   
          0.560
Mettu_1762
KEGG- son-SO_4365 hypothetical protein (293 aa)
 
          0.552
Mettu_0020
PFAM- TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG- mca-MCA2321 TonB-dependent receptor, putative (683 aa)
   
          0.550
Mettu_2251
PFAM- TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG- rva-Rvan_3612 TonB-dependent receptor plug (915 aa)
   
          0.547
Mettu_1566
Multi-sensor signal transduction histidine kinase; TIGRFAM- PAS; PFAM- ATP-binding region, ATPase-like; CHASE; PAS fold-3; KEGG- tgr-Tgr7_1851 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); SMART- ATP-binding region, ATPase-like; PAC motif; PAS (707 aa)
              0.505
Mettu_1913
KEGG- spl-Spea_1502 hypothetical protein (132 aa)
   
          0.486
Mettu_2304
Efflux transporter, RND family, MFP subunit; KEGG- nmu-Nmul_A1841 secretion protein HlyD; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (388 aa)
   
          0.457
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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