Mettu_1575 protein (Methylobacter tundripaludum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

Mettu_1575

annotation not available (64 aa)

Predicted Functional Partners:

Mettu_1574

0.619

Mettu_1573

0.619

Mettu_1576

0.598

Mettu_1577

0.541

Mettu_1580

0.530

Mettu_1579

0.530

Mettu_1578

0.530

Mettu_1572

0.447

Mettu_1571

0.447

Mettu_1570

0.447

Your Current Organism:

Methylobacter tundripaludum

NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Mettu_1570	Mettu_1571	KEGG- putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family	PFAM- Protein of unknown function DUF1538; KEGG- vpa-VP0812 hypothetical protein; overlaps another CDS with the same product name	0.975
Mettu_1570	Mettu_1572	KEGG- putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family	PFAM- Protein of unknown function DUF1538; KEGG- ttu-TERTU_3437 hypothetical protein; overlaps another CDS with the same product name	0.968
Mettu_1570	Mettu_1573	KEGG- putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family	Response regulator receiver protein; KEGG- mfa-Mfla_2394 two component transcriptional regulator; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region	0.595
Mettu_1570	Mettu_1574	KEGG- putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family	KEGG- lhk-LHK_00888 sensor protein; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region	0.593
Mettu_1570	Mettu_1575	KEGG- putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family	annotation not available	0.447
Mettu_1571	Mettu_1570	PFAM- Protein of unknown function DUF1538; KEGG- vpa-VP0812 hypothetical protein; overlaps another CDS with the same product name	KEGG- putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family	0.975
Mettu_1571	Mettu_1572	PFAM- Protein of unknown function DUF1538; KEGG- vpa-VP0812 hypothetical protein; overlaps another CDS with the same product name	PFAM- Protein of unknown function DUF1538; KEGG- ttu-TERTU_3437 hypothetical protein; overlaps another CDS with the same product name	0.897
Mettu_1571	Mettu_1573	PFAM- Protein of unknown function DUF1538; KEGG- vpa-VP0812 hypothetical protein; overlaps another CDS with the same product name	Response regulator receiver protein; KEGG- mfa-Mfla_2394 two component transcriptional regulator; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region	0.593
Mettu_1571	Mettu_1574	PFAM- Protein of unknown function DUF1538; KEGG- vpa-VP0812 hypothetical protein; overlaps another CDS with the same product name	KEGG- lhk-LHK_00888 sensor protein; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region	0.593
Mettu_1571	Mettu_1575	PFAM- Protein of unknown function DUF1538; KEGG- vpa-VP0812 hypothetical protein; overlaps another CDS with the same product name	annotation not available	0.447
Mettu_1572	Mettu_1570	PFAM- Protein of unknown function DUF1538; KEGG- ttu-TERTU_3437 hypothetical protein; overlaps another CDS with the same product name	KEGG- putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family	0.968
Mettu_1572	Mettu_1571	PFAM- Protein of unknown function DUF1538; KEGG- ttu-TERTU_3437 hypothetical protein; overlaps another CDS with the same product name	PFAM- Protein of unknown function DUF1538; KEGG- vpa-VP0812 hypothetical protein; overlaps another CDS with the same product name	0.897
Mettu_1572	Mettu_1573	PFAM- Protein of unknown function DUF1538; KEGG- ttu-TERTU_3437 hypothetical protein; overlaps another CDS with the same product name	Response regulator receiver protein; KEGG- mfa-Mfla_2394 two component transcriptional regulator; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region	0.593
Mettu_1572	Mettu_1574	PFAM- Protein of unknown function DUF1538; KEGG- ttu-TERTU_3437 hypothetical protein; overlaps another CDS with the same product name	KEGG- lhk-LHK_00888 sensor protein; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region	0.593
Mettu_1572	Mettu_1575	PFAM- Protein of unknown function DUF1538; KEGG- ttu-TERTU_3437 hypothetical protein; overlaps another CDS with the same product name	annotation not available	0.447
Mettu_1573	Mettu_1570	Response regulator receiver protein; KEGG- mfa-Mfla_2394 two component transcriptional regulator; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region	KEGG- putative nitrogen regulatory protein P-II; Belongs to the P(II) protein family	0.595
Mettu_1573	Mettu_1571	Response regulator receiver protein; KEGG- mfa-Mfla_2394 two component transcriptional regulator; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region	PFAM- Protein of unknown function DUF1538; KEGG- vpa-VP0812 hypothetical protein; overlaps another CDS with the same product name	0.593
Mettu_1573	Mettu_1572	Response regulator receiver protein; KEGG- mfa-Mfla_2394 two component transcriptional regulator; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region	PFAM- Protein of unknown function DUF1538; KEGG- ttu-TERTU_3437 hypothetical protein; overlaps another CDS with the same product name	0.593
Mettu_1573	Mettu_1574	Response regulator receiver protein; KEGG- mfa-Mfla_2394 two component transcriptional regulator; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region	KEGG- lhk-LHK_00888 sensor protein; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region	0.971
Mettu_1573	Mettu_1575	Response regulator receiver protein; KEGG- mfa-Mfla_2394 two component transcriptional regulator; PFAM- Signal transduction response regulator, receiver region; SMART- Signal transduction response regulator, receiver region	annotation not available	0.619

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