STRINGSTRING
Mettu_1584 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1584" - TrkA-N domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1584TrkA-N domain protein (534 aa)    
Predicted Functional Partners:
Mettu_1583
TrkA-N domain protein (230 aa)
 
       
0.899
Mettu_1582
Putative uncharacterized protein (214 aa)
              0.741
Mettu_1581
Putative uncharacterized protein (57 aa)
              0.741
Mettu_1460
Pyridoxine 4-dehydrogenase (329 aa)
     
    0.705
Mettu_0287
Putative uncharacterized protein (754 aa)
     
      0.623
Mettu_1748
Aminotransferase class I and II (339 aa)
   
      0.593
Mettu_2478
Arabinose 5-phosphate isomerase (325 aa)
         
  0.569
Mettu_1586
Short-chain dehydrogenase/reductase SDR (238 aa)
              0.529
Mettu_1585
Putative uncharacterized protein (38 aa)
              0.529
Mettu_2826
Imidazole acetol-phosphate transaminase (386 aa)
     
      0.523
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (7%) [HD]