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STRINGSTRING
Mettu_1591 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1591" - UPF0235 protein Mettu_1591 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1591UPF0235 protein Mettu_1591; PFAM- Protein of unknown function DUF167; manually curated; TIGRFAM- Conserved hypothetical protein CHP00251; KEGG- avn-Avin_03050 hypothetical protein; HAMAP- Protein of unknown function DUF167; Belongs to the UPF0235 family (100 aa)    
Predicted Functional Partners:
Mettu_1590
PFAM- Protein of unknown function YGGT; KEGG- mca-MCA1534 YGGT family protein (191 aa)
   
        0.890
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (275 aa)
              0.889
Mettu_1588
annotation not available (45 aa)
              0.588
Mettu_1592
KEGG- mca-MCA2739 hypothetical protein (330 aa)
              0.517
Mettu_1587
KEGG- wch-wcw_0148 putative DNA repair photolyase (329 aa)
              0.492
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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