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STRINGSTRING
Mettu_1625 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1625" - PFAM: Abortive infection protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1625PFAM- Abortive infection protein; KEGG- mca-MCA0527 hypothetical protein (291 aa)    
Predicted Functional Partners:
Mettu_1624
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (253 aa)
   
        0.852
bioA
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily (450 aa)
              0.848
Mettu_0425
KEGG- hypothetical protein (579 aa)
   
 
      0.759
Mettu_0339
KEGG- mca-MCA1689 hypothetical protein (428 aa)
   
          0.711
Mettu_2026
KEGG- mmb-Mmol_1761 hypothetical protein (101 aa)
   
          0.698
Mettu_1811
KEGG- mca-MCA0965 hypothetical protein (193 aa)
   
          0.697
Mettu_1878
PFAM- General secretion pathway protein M; KEGG- mca-MCA1122 general secretion pathway protein, putative (195 aa)
   
          0.693
Mettu_0411
KEGG- app-CAP2UW1_1888 phospholipase D/transphosphatidylase (530 aa)
 
          0.685
Mettu_1083
KEGG- pmy-Pmen_0549 sporulation domain-containing protein; PFAM- Sporulation/cell division region, bacteria; SMART- ATPase, AAA+ type, core (628 aa)
   
        0.682
Mettu_2440
KEGG- alv-Alvin_1745 hypothetical protein (421 aa)
   
          0.650
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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