• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_1641 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1641" - PFAM: Acriflavin resistance protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1641PFAM- Acriflavin resistance protein; KEGG- mca-MCA2815 AcrB/AcrD/AcrF family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (484 aa)    
Predicted Functional Partners:
Mettu_1642
KEGG- mca-MCA2814 RND family efflux transporter MFP subunit; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (491 aa)
 
    0.982
Mettu_3504
Efflux transporter, RND family, MFP subunit; KEGG- mca-MCA1361 HlyD family secretion protein; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (457 aa)
  0.847
Mettu_3716
KEGG- bph-Bphy_5503 RND family efflux transporter MFP subunit; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (383 aa)
  0.834
Mettu_0196
Efflux transporter, RND family, MFP subunit; KEGG- mca-MCA1596 HlyD family multidrug efflux protein; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (425 aa)
  0.834
Mettu_2236
KEGG- rpf-Rpic12D_4296 efflux transporter, RND family, MFP subunit; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (421 aa)
  0.741
Mettu_4327
Efflux transporter, RND family, MFP subunit; KEGG- mca-MCA2153 HlyD family secretion protein; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (361 aa)
 
    0.721
Mettu_4063
KEGG- mca-MCA1277 outer membrane protein TolC, putative; TIGRFAM- Type I secretion outer membrane protein, TolC; PFAM- Outer membrane efflux protein (449 aa)
 
  0.715
Mettu_1453
KEGG- mmb-Mmol_0046 type I secretion outer membrane protein, TolC family; TIGRFAM- Type I secretion outer membrane protein, TolC; PFAM- Outer membrane efflux protein (451 aa)
   
  0.715
Mettu_2443
KEGG- pna-Pnap_3901 RND family efflux transporter MFP subunit; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (370 aa)
    0.689
Mettu_2693
KEGG- mca-MCA0682 preprotein translocase YajC subunit; TIGRFAM- YajC; PFAM- YajC (116 aa)
       
 
  0.655
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]