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Mettu_1683 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1683" - KEGG: mag:amb3947 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1683KEGG- mag-amb3947 hypothetical protein (273 aa)    
Predicted Functional Partners:
Mettu_1682
PFAM- Ribonuclease T2; KEGG- azc-AZC_3138 ribonuclease T2 precursor; Belongs to the RNase T2 family (210 aa)
              0.668
Mettu_1681
annotation not available (61 aa)
              0.624
Mettu_1684
PFAM- Phosphoesterase; KEGG- bpr-GBP346_A1832 phosphoesterase family protein (480 aa)
              0.552
Mettu_4240
KEGG- meh-M301_2272 chain length determinant protein EpsF; TIGRFAM- Chain length determinant protein EpsF; PFAM- Lipopolysaccharide biosynthesis (462 aa)
   
          0.472
Mettu_0390
PFAM- Peptidase M28; KEGG- nhl-Nhal_0189 peptidase M28 (291 aa)
   
          0.464
Mettu_2648
PFAM- Type IV pilus assembly PilZ; KEGG- tmz-Tmz1t_0639 type IV pilus assembly PilZ (217 aa)
   
          0.461
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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