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Mettu_1728 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1728" - TonB-dependent receptor in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1728TonB-dependent receptor (853 aa)    
Predicted Functional Partners:
Mettu_1727
Multi-sensor hybrid histidine kinase (1759 aa)
 
          0.893
Mettu_1703
TonB-dependent receptor plug (799 aa)
   
     
  0.742
Mettu_1629
Alpha/beta hydrolase fold protein (288 aa)
   
          0.710
Mettu_1563
Putative uncharacterized protein (268 aa)
   
          0.696
Mettu_1168
Putative uncharacterized protein (426 aa)
   
          0.666
Mettu_4339
Glucose/galactose transporter (424 aa)
   
          0.600
Mettu_2251
TonB-dependent receptor plug (915 aa)
   
          0.551
Mettu_1726
Putative signal transduction histidine kinase (659 aa)
              0.547
Mettu_1762
Putative uncharacterized protein (293 aa)
   
          0.532
Mettu_0562
Putative PAS/PAC sensor protein (283 aa)
   
          0.503
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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