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STRINGSTRING
Mettu_1735 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1735" - PFAM: Protein of unknown function DUF526 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1735PFAM- Protein of unknown function DUF526; KEGG- cbc-CbuK_2074 hypothetical protein (86 aa)    
Predicted Functional Partners:
Mettu_1734
Sigma 54 interacting domain protein; TIGRFAM- Mg chelatase-related protein; PFAM- Magnesium chelatase, ChlI subunit; KEGG- nhl-Nhal_3276 Mg chelatase, subunit ChlI; SMART- ATPase, AAA+ type, core (503 aa)
              0.854
Mettu_1733
KEGG- fjo-Fjoh_3586 hypothetical protein (280 aa)
              0.624
Mettu_2292
PFAM- Glutamine amidotransferase, class-II; KEGG- asa-ASA_2782 glutamine amidotransferase (259 aa)
      
        0.555
speE
Polyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family (282 aa)
              0.540
Mettu_3401
UPF0125 protein Mettu_3401; KEGG- mca-MCA2818 electron transport complex, H subunit; HAMAP- Protein rnfH; PFAM- Uncharacterised protein family UPF0125; Belongs to the UPF0125 (RnfH) family (86 aa)
    
          0.520
Mettu_3012
UPF0125 protein Mettu_3012; KEGG- nhl-Nhal_0884 protein of unknown function UPF0125; HAMAP- Protein rnfH; PFAM- Uncharacterised protein family UPF0125; Belongs to the UPF0125 (RnfH) family (91 aa)
    
          0.516
rep
ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3’ to 5’ direction (667 aa)
 
          0.502
Mettu_2553
Sterol-binding domain protein; PFAM- Sterol-binding; KEGG- tgr-Tgr7_0060 sterol-binding domain protein (206 aa)
    
          0.460
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination (249 aa)
 
          0.450
dsbD
Thiol-disulfide interchange protein DsbD; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps (732 aa)
 
          0.425
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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