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speA protein (Methylobacter tundripaludum) - STRING interaction network
"speA" - Biosynthetic arginine decarboxylase in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
speABiosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine (608 aa)    
Predicted Functional Partners:
Mettu_0161
Agmatine deiminase; KEGG- mca-MCA1861 hypothetical protein; PFAM- Peptidyl-arginine deiminase, Porphyromonas-type; Belongs to the agmatine deiminase family (341 aa)
 
   
  0.945
Mettu_0651
Arginase; KEGG- nwa-Nwat_1416 arginase/agmatinase/formiminoglutamase; PFAM- Ureohydrolase; Belongs to the arginase family (288 aa)
   
  0.930
argH
PFAM- Fumarate lyase; TIGRFAM- Argininosuccinate lyase; HAMAP- Argininosuccinate lyase; KEGG- maq-Maqu_0490 argininosuccinate lyase (482 aa)
     
 
  0.814
speE
Polyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family (282 aa)
       
  0.801
Mettu_1498
Aminotransferase; KEGG- mca-MCA2202 aspartate aminotransferase; PFAM- Aminotransferase, class I/II (393 aa)
       
  0.792
Mettu_1039
Aminotransferase; KEGG- tgr-Tgr7_1438 aminotransferase class I and II; PFAM- Aminotransferase, class I/II (394 aa)
       
  0.770
Mettu_0157
N-carbamoylputrescine amidase; KEGG- geo-Geob_2344 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM- Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (294 aa)
 
     
  0.723
argA
Amino-acid acetyltransferase; KEGG- mca-MCA2084 N-acetylglutamate synthase; TIGRFAM- Amino-acid N-acetyltransferase (ArgA); PFAM- Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily (438 aa)
   
 
  0.715
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (87 aa)
       
      0.657
Mettu_1740
KEGG- nwa-Nwat_1020 6-phosphogluconate dehydrogenase NAD-binding protein; PFAM- 6-phosphogluconate dehydrogenase, NAD-binding (285 aa)
              0.650
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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