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Mettu_1761 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1761" - Transcriptional regulator, Crp/Fnr family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1761Transcriptional regulator, Crp/Fnr family; KEGG- nhl-Nhal_0863 cyclic nucleotide-binding protein; PFAM- Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART- Cyclic nucleotide-binding; HTH transcriptional regulator, Crp (218 aa)    
Predicted Functional Partners:
Mettu_0913
Adenylate/guanylate cyclase with Chase sensor; PFAM- CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG- mgm-Mmc1_1858 adenylate/guanylate cyclase; SMART- Adenylyl cyclase class-3/4/guanylyl cyclase (744 aa)
   
  0.928
Mettu_3269
KEGG- nhl-Nhal_3565 adenylate cyclase; PFAM- Adenylate cyclase, class-I (936 aa)
   
 
  0.928
Mettu_2434
KEGG- gpb-HDN1F_00940 adenylate cyclase; PFAM- Adenylate cyclase, class-I (934 aa)
   
 
  0.928
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (337 aa)
     
      0.917
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (81 aa)
       
      0.917
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1397 aa)
       
 
  0.914
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1364 aa)
       
      0.913
Mettu_3480
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1212 aa)
       
  0.853
Mettu_0758
KEGG- mca-MCA2039 glutamate synthase, large subunit; PFAM- Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, central-C; Glutamate synthase, alpha subunit, C-terminal (1539 aa)
   
 
  0.813
rpoS
KEGG- alv-Alvin_0780 RNA polymerase sigma-70 subunit RpoD subfamily; TIGRFAM- RNA polymerase sigma factor RpoS, proteobacteria; RNA polymerase sigma-70; PFAM- RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4 (342 aa)
     
 
  0.776
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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