STRINGSTRING
Mettu_1765 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1765" - Transcriptional regulator, LysR family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1765Transcriptional regulator, LysR family (304 aa)    
Predicted Functional Partners:
Mettu_3591
Transcriptional regulator, LysR family (290 aa)
   
          0.747
Mettu_2124
Transcriptional regulator, LysR family (287 aa)
   
          0.556
Mettu_1766
Polysaccharide biosynthesis protein CapD (669 aa)
              0.544
Mettu_2939
Pirin domain protein (286 aa)
         
  0.503
Mettu_0267
Pirin domain protein (285 aa)
         
  0.503
Mettu_3537
Extradiol ring-cleavage dioxygenase class III protein subunit B (267 aa)
              0.493
Mettu_1767
Glycosyl transferase, family 4, conserved region-containing protein (344 aa)
         
  0.449
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]