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STRINGSTRING
Mettu_1796 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1796" - PFAM: DegT/DnrJ/EryC1/StrS aminotransferase in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Mettu_1796PFAM- DegT/DnrJ/EryC1/StrS aminotransferase; KEGG- gca-Galf_2848 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family (538 aa)    
Predicted Functional Partners:
Mettu_1798
TIGRFAM- CDP-glucose 4,6-dehydratase; KEGG- gca-Galf_2849 CDP-glucose 4,6-dehydratase; PFAM- NAD-dependent epimerase/dehydratase (369 aa)
 
 
  0.986
Mettu_1795
PFAM- NAD-dependent epimerase/dehydratase; KEGG- gca-Galf_2845 NAD-dependent epimerase/dehydratase (290 aa)
 
 
  0.958
Mettu_1799
TIGRFAM- Glucose-1-phosphate cytidylyltransferase; KEGG- gca-Galf_2850 glucose-1-phosphate cytidylyltransferase; PFAM- Nucleotidyl transferase (255 aa)
 
   
  0.934
Mettu_1794
CDP-paratose 2-epimerase; KEGG- gca-Galf_2844 NAD-dependent epimerase/dehydratase; PFAM- NAD-dependent epimerase/dehydratase (340 aa)
 
 
  0.909
Mettu_1792
PFAM- Glycosyl transferase, family 2; KEGG- gur-Gura_3784 glycosyl transferase family protein (326 aa)
 
     
  0.871
Mettu_1793
PFAM- Polysaccharide biosynthesis protein; KEGG- pin-Ping_0778 polysaccharide biosynthesis protein (442 aa)
 
     
  0.871
Mettu_1797
annotation not available (76 aa)
              0.845
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (361 aa)
       
  0.746
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (319 aa)
   
 
  0.745
Mettu_1940
Methane monooxygenase; KEGG- tbi-Tbis_0140 oxidoreductase FAD/NAD(P)-binding domain-containing protein; PFAM- Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region; Ferredoxin (345 aa)
       
  0.681
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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