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gmd protein (Methylobacter tundripaludum) - STRING interaction network
"gmd" - GDP-D-mannose dehydratase in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmdGDP-D-mannose dehydratase ; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (361 aa)    
Predicted Functional Partners:
fcl
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase ; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (319 aa)
 
  0.999
Mettu_1802
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (500 aa)
 
 
  0.998
Mettu_1799
Glucose-1-phosphate cytidylyltransferase (255 aa)
   
 
  0.979
Mettu_1798
CDP-glucose 4,6-dehydratase (369 aa)
   
0.976
Mettu_1796
DegT/DnrJ/EryC1/StrS aminotransferase (538 aa)
       
  0.952
Mettu_3892
Glutamine--scyllo-inositol transaminase (398 aa)
       
  0.945
Mettu_3889
Glutamine--scyllo-inositol transaminase (372 aa)
       
  0.945
Mettu_2532
Glutamine--scyllo-inositol transaminase (370 aa)
       
  0.945
Mettu_1784
DegT/DnrJ/EryC1/StrS aminotransferase (371 aa)
       
  0.945
Mettu_1279
DegT/DnrJ/EryC1/StrS aminotransferase (382 aa)
       
  0.945
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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