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Mettu_1812 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1812" - Uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1812Uncharacterized protein; PFAM- Domain of unknown function DUF1987; KEGG- rme-Rmet_2261 hypothetical protein (128 aa)    
Predicted Functional Partners:
Mettu_1813
KEGG- dac-Daci_1586 hypothetical protein (184 aa)
          0.989
Mettu_1814
Protein serine/threonine phosphatase; KEGG- rme-Rmet_2259 serine phosphatase; PFAM- Sporulation stage II, protein E C-terminal; Cystathionine beta-synthase, core; SMART- Protein phosphatase 2C-related (426 aa)
 
        0.963
Mettu_1816
Integral membrane sensor signal transduction histidine kinase; KEGG- nhl-Nhal_0597 ATP-binding region ATPase domain protein; PFAM- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region (565 aa)
              0.453
Mettu_1815
Two component, sigma54 specific, transcriptional regulator, Fis family; KEGG- nhl-Nhal_0598 sigma-54 factor interaction domain-containing protein; PFAM- RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART- Signal transduction response regulator, receiver region; ATPase, AAA+ type, core (447 aa)
              0.446
Mettu_1579
KEGG- rce-RC1_3819 hypothetical protein (444 aa)
   
          0.434
Mettu_1097
PFAM- Outer membrane efflux protein; KEGG- cvi-CV_0465 hypothetical protein (518 aa)
   
          0.423
Mettu_1095
KEGG- rce-RC1_3819 hypothetical protein (457 aa)
   
          0.422
Mettu_0862
KEGG- slt-Slit_0894 uncharacterized protein putative lipoprotein-like protein (333 aa)
   
          0.407
Mettu_1094
PFAM- Peptidase M50; KEGG- pvi-Cvib_0429 peptidase M50 (704 aa)
   
          0.404
Mettu_1580
PFAM- Secretion protein HlyD; KEGG- rce-RC1_3818 hypothetical protein (708 aa)
   
          0.403
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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