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Mettu_1815 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1815" - Two component, sigma54 specific, transcriptional regulator, Fis family in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1815Two component, sigma54 specific, transcriptional regulator, Fis family (447 aa)    
Predicted Functional Partners:
Mettu_1816
Integral membrane sensor signal transduction histidine kinase (565 aa)
 
 
  0.998
Mettu_1182
Signal transduction histidine kinase, nitrogen specific, NtrB (351 aa)
 
  0.996
Mettu_2483
RNA polymerase sigma-54 factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (481 aa)
 
   
  0.995
Mettu_2301
Multi-sensor signal transduction histidine kinase (1161 aa)
 
  0.984
Mettu_3767
Multi-sensor signal transduction histidine kinase (724 aa)
 
 
  0.968
Mettu_3661
PAS/PAC sensor signal transduction histidine kinase (417 aa)
 
   
  0.966
Mettu_0233
Multi-sensor signal transduction multi-kinase (1710 aa)
       
  0.945
Mettu_1011
Integral membrane sensor signal transduction histidine kinase (483 aa)
 
  0.929
Mettu_2178
Histidine kinase (348 aa)
 
  0.927
Mettu_4310
Multi-sensor signal transduction histidine kinase (907 aa)
   
  0.917
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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