STRINGSTRING
Mettu_1815 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1815" - Two component, sigma54 specific, transcriptional regulator, Fis family in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1815Two component, sigma54 specific, transcriptional regulator, Fis family (447 aa)    
Predicted Functional Partners:
Mettu_1816
Integral membrane sensor signal transduction histidine kinase (565 aa)
 
 
  0.998
Mettu_1182
Signal transduction histidine kinase, nitrogen specific, NtrB (351 aa)
 
  0.996
Mettu_2483
RNA polymerase sigma-54 factor ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (481 aa)
 
   
  0.995
Mettu_2301
Multi-sensor signal transduction histidine kinase (1161 aa)
 
  0.984
Mettu_3767
Multi-sensor signal transduction histidine kinase (724 aa)
 
 
  0.968
Mettu_3661
PAS/PAC sensor signal transduction histidine kinase (417 aa)
 
   
  0.966
Mettu_0233
Multi-sensor signal transduction multi-kinase (1710 aa)
       
  0.945
Mettu_1011
Integral membrane sensor signal transduction histidine kinase (483 aa)
 
  0.929
Mettu_2178
Histidine kinase (348 aa)
 
  0.927
Mettu_4310
Multi-sensor signal transduction histidine kinase (907 aa)
   
  0.917
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >