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STRINGSTRING
Mettu_1856 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1856" - PFAM: Glycosyl transferase, family 2 in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1856PFAM- Glycosyl transferase, family 2; KEGG- rpi-Rpic_2399 glycosyl transferase family 2 (282 aa)    
Predicted Functional Partners:
Mettu_1857
PFAM- Glycosyl transferase, family 2; KEGG- meh-M301_2022 glycosyl transferase family 2 (248 aa)
 
  0.991
Mettu_1858
PFAM- Glycosyl transferase, family 25; KEGG- vsp-VS_0190 putative glycosyltransferase (241 aa)
              0.775
msbA
Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation; Belongs to the ABC transporter superfamily. Lipid exporter (TC 3.A.1.106) family (597 aa)
              0.759
Mettu_1859
Manually curated; TIGRFAM- Lipopolysaccharide heptosyltransferase III, putative; KEGG- bpd-BURPS668_1203 putative lipopolysaccharide heptosyltransferase III; PFAM- Glycosyl transferase, family 9 (367 aa)
 
     
  0.712
hldE
Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose; In the N-terminal section; belongs to the carbohydrate kinase PfkB family (474 aa)
   
 
  0.692
hldD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose (314 aa)
   
        0.617
Mettu_1854
PFAM- Sugar isomerase (SIS); KEGG- cje-Cj1149c phosphoheptose isomerase (172 aa)
              0.616
Mettu_4232
PFAM- Glycosyl transferase, family 2; KEGG- meh-M301_2264 glycosyl transferase family 2 (331 aa)
 
 
  0.537
Mettu_2134
KEGG- dat-HRM2_37590 glycosyl transferase family protein; manually curated; PFAM- Glycosyl transferase, family 2 (274 aa)
 
          0.516
Mettu_3511
PFAM- Glycosyl transferase, family 2; KEGG- srm-SRM_00268 glycosyl transferase, family 2 (260 aa)
 
  0.465
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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