• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_1881 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1881" - Ribose-5-phosphate isomerase A in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1881Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (217 aa)    
Predicted Functional Partners:
Mettu_1370
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (661 aa)
 
  0.994
Mettu_2853
Transketolase domain-containing protein; PFAM- Transketolase, C-terminal; Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; KEGG- npu-Npun_F4396 transketolase domain-containing protein; Belongs to the transketolase family (644 aa)
   
  0.986
Mettu_2358
TIGRFAM- Ribulose-phosphate 3-epimerase; KEGG- swp-swp_2072 ribulose-phosphate 3-epimerase; PFAM- Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family (223 aa)
   
  0.917
Mettu_2030
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH; Belongs to the 6-phosphogluconate dehydrogenase family (481 aa)
 
 
  0.872
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily (317 aa)
     
 
  0.839
Mettu_1372
TIGRFAM- 3-hexulose-6-phosphate synthase; KEGG- mca-MCA3049 hexulose-6-phosphate synthase; PFAM- Orotidine 5’-phosphate decarboxylase, core (213 aa)
 
   
  0.824
Mettu_1557
KEGG- mca-MCA0607 phosphoglucomutase; PFAM- Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal (544 aa)
   
 
  0.823
Mettu_1489
TIGRFAM- Phosphoribosyl pyrophosphokinase; KEGG- rfr-Rfer_2240 phosphoribosylpyrophosphate synthetase; PFAM- Phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family (292 aa)
     
 
  0.813
Mettu_1740
KEGG- nwa-Nwat_1020 6-phosphogluconate dehydrogenase NAD-binding protein; PFAM- 6-phosphogluconate dehydrogenase, NAD-binding (285 aa)
   
 
    0.805
Mettu_1833
Phosphoglucomutase; KEGG- nhl-Nhal_3802 phosphomannomutase; PFAM- Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal (880 aa)
   
 
  0.789
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (17%) [HD]