• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_1893 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1893" - Transcriptional regulator/antitoxin, MazE in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1893Transcriptional regulator/antitoxin, MazE; PFAM- Transcription regulator AbrB/SpoV, predicted; KEGG- apt-APA01_41500 transcriptional regulator AbrB (81 aa)    
Predicted Functional Partners:
Mettu_1892
mRNA interferase; Toxic component of a toxin-antitoxin (TA) module (110 aa)
 
  0.987
Mettu_4366
Transcriptional modulator of MazE/toxin, MazF; PFAM- PemK-like protein; KEGG- xac-XACa0027 plasmid stable inheritance protein K (110 aa)
 
  0.921
Mettu_4172
Transcriptional modulator of MazE/toxin, MazF; PFAM- PemK-like protein; KEGG- abu-Abu_1572 PemK family transcriptional regulator (106 aa)
 
  0.833
Mettu_1435
KEGG- npu-Npun_BF047 transcriptional modulator of MazE/toxin, MazF (112 aa)
 
  0.754
Mettu_4365
SpoVT/AbrB domain-containing protein; PFAM- Transcription regulator AbrB/SpoV, predicted; KEGG- xac-XACa0028 plasmid stable inheritance protein I (85 aa)
   
          0.699
Mettu_4022
KEGG- gca-Galf_1887 GCN5-related N-acetyltransferase; manually curated; PFAM- GCN5-related N-acetyltransferase (165 aa)
   
          0.493
Mettu_1722
KEGG- gur-Gura_2272 hypothetical protein; manually curated; PFAM- Protein of unknown function DUF497 (94 aa)
   
          0.483
Mettu_0489
KEGG- HicB family protein (112 aa)
   
     
  0.471
Mettu_2291
KEGG- hse-Hsero_1815 histone acetyltransferase HPA2 protein (160 aa)
   
          0.471
Mettu_2913
PFAM- Protein of unknown function DUF497; KEGG- glo-Glov_2221 protein of unknown function DUF497 (97 aa)
   
          0.451
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]