STRINGSTRING
Mettu_1911 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1911" - Putative uncharacterized protein in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1911Putative uncharacterized protein (263 aa)    
Predicted Functional Partners:
Mettu_1912
UPF0276 protein Mettu_1912 (283 aa)
 
        0.974
Mettu_1913
Putative uncharacterized protein (132 aa)
 
        0.901
Mettu_4010
DoxX family protein (190 aa)
 
        0.869
Mettu_1168
Putative uncharacterized protein (426 aa)
   
          0.634
Mettu_1563
Putative uncharacterized protein (268 aa)
   
          0.531
Mettu_2940
DoxX family protein (151 aa)
   
        0.464
Mettu_0779
Putative uncharacterized protein (301 aa)
   
          0.430
Mettu_2711
Putative uncharacterized protein (141 aa)
   
          0.428
nth
DNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (241 aa)
              0.425
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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