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Mettu_1913 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1913" - KEGG: spl:Spea_1502 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1913KEGG- spl-Spea_1502 hypothetical protein (132 aa)    
Predicted Functional Partners:
Mettu_1911
PFAM- Protein of unknown function DUF2063; KEGG- nhl-Nhal_2720 hypothetical protein (263 aa)
 
        0.923
Mettu_1912
UPF0276 protein Mettu_1912; KEGG- mca-MCA3108 hypothetical protein; HAMAP- UPF0276 protein; PFAM- Protein of unknown function DUF692; Belongs to the UPF0276 family (283 aa)
 
        0.873
Mettu_4011
KEGG- spl-Spea_1502 hypothetical protein (98 aa)
   
          0.736
Mettu_3969
KEGG- cps-CPS_0317 hypothetical protein; manually curated; PFAM- Protein of unknown function DUF1289 (62 aa)
   
          0.705
Mettu_1762
KEGG- son-SO_4365 hypothetical protein (293 aa)
   
          0.677
Mettu_1168
KEGG- rmr-Rmar_1225 hypothetical protein (426 aa)
   
          0.597
Mettu_2194
PFAM- Uncharacterised conserved protein UCP029693; KEGG- mca-MCA0862 hypothetical protein (356 aa)
   
          0.581
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (241 aa)
              0.559
Mettu_1190
KEGG- eba-p1B286 hypothetical protein (409 aa)
   
          0.508
lptE
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (165 aa)
   
          0.502
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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