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Mettu_1921 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1921" - Thioredoxin in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1921Thioredoxin; KEGG- mca-MCA0057 thioredoxin; TIGRFAM- Thioredoxin; PFAM- Thioredoxin domain; Belongs to the thioredoxin family (108 aa)    
Predicted Functional Partners:
Mettu_2599
TIGRFAM- Thioredoxin reductase; KEGG- tcx-Tcr_0763 thioredoxin reductase; PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (318 aa)
 
  0.991
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (418 aa)
 
   
  0.918
Mettu_3471
KEGG- rfr-Rfer_1613 selenide, water dikinase; TIGRFAM- Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; Selenide water dikinase; PFAM- AIR synthase related protein, C-terminal; AIR synthase related protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the selenophosphate synthase 1 family. Class I subfamily (756 aa)
     
  0.895
Mettu_1405
Methionine synthase; TIGRFAM- 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG- mca-MCA1545 B12-dependent methionine synthase; PFAM- Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region (1226 aa)
         
  0.854
dnaK
Chaperone protein DnaK; Acts as a chaperone (644 aa)
 
 
  0.781
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
     
 
  0.749
Mettu_2900
PFAM- Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG- mca-MCA0664 anti-oxidant AhpCTSA family protein (156 aa)
     
 
  0.748
groL
60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (550 aa)
 
 
  0.738
Mettu_2384
Peroxiredoxin; KEGG- abo-ABO_0723 oxidoreductase; PFAM- Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal (200 aa)
     
 
  0.736
Mettu_0307
Adenylylsulfate reductase, thioredoxin dependent; Reduction of activated sulfate into sulfite (241 aa)
       
  0.707
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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