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Mettu_1930 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1930" - KEGG: gpb:HDN1F_30440 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1930KEGG- gpb-HDN1F_30440 hypothetical protein (156 aa)    
Predicted Functional Partners:
Mettu_1928
Von Willebrand factor type A; KEGG- mca-MCA3086 TPR domain-containing protein; PFAM- von Willebrand factor, type A; Tetratricopeptide TPR-1; SMART- von Willebrand factor, type A; Tetratricopeptide repeat; overlaps another CDS with the same product name (600 aa)
 
          0.972
Mettu_1929
Von Willebrand factor type A; KEGG- mca-MCA3085 BatB protein, putative; PFAM- von Willebrand factor, type A; SMART- von Willebrand factor, type A; overlaps another CDS with the same product name (326 aa)
 
          0.971
Mettu_1931
PFAM- Protein of unknown function DUF58; KEGG- mca-MCA3083 hypothetical protein (302 aa)
 
   
  0.969
Mettu_1932
PFAM- ATPase associated with various cellular activities, AAA-3; KEGG- mca-MCA2741 hypothetical protein (349 aa)
 
   
  0.932
Mettu_1926
KEGG- mca-MCA3087 hypothetical protein (562 aa)
 
          0.925
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
     
 
  0.827
Mettu_2781
Magnesium chelatase; PFAM- von Willebrand factor, type A; Magnesium chelatase, ChlI subunit; KEGG- hse-Hsero_2656 Mg-chelatase subunit ChlI protein; SMART- von Willebrand factor, type A; ATPase, AAA+ type, core (629 aa)
   
 
  0.660
Mettu_1927
PfkB domain protein; PFAM- Carbohydrate/purine kinase; KEGG- alv-Alvin_0250 PfkB domain-containing protein (295 aa)
              0.606
Mettu_2553
Sterol-binding domain protein; PFAM- Sterol-binding; KEGG- tgr-Tgr7_0060 sterol-binding domain protein (206 aa)
   
          0.556
Mettu_1592
KEGG- mca-MCA2739 hypothetical protein (330 aa)
   
          0.436
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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