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Mettu_1957 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1957" - Helix-turn-helix domain protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1957Helix-turn-helix domain protein; KEGG- rsc-RCFBP_20815 hypothetical protein; PFAM- Helix-turn-helix type 3; SMART- Helix-turn-helix type 3 (130 aa)    
Predicted Functional Partners:
Mettu_1849
KEGG- HipA domain-containing protein (306 aa)
     
 
  0.688
Mettu_2658
CoA-binding domain protein; PFAM- CoA-binding; GCN5-related N-acetyltransferase; KEGG- gca-Galf_1381 CoA-binding domain-containing protein (893 aa)
         
  0.610
Mettu_3921
PFAM- 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG- rce-RC1_1947 3-hydroxyacyl-CoA dehydrogenase, putative (779 aa)
       
  0.466
Mettu_1961
KEGG- pst-PSPTO_0030 hypothetical protein (614 aa)
   
          0.452
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (930 aa)
         
  0.424
Mettu_1956
annotation not available (71 aa)
              0.419
Mettu_1960
KEGG- bgf-BC1003_0018 TniB family protein; PFAM- Bacterial TniB; SMART- ATPase, AAA+ type, core (323 aa)
 
          0.418
Mettu_1981
KEGG- bgf-BC1003_0019 hypothetical protein (259 aa)
   
          0.406
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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