STRINGSTRING
Mettu_1959 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1959" - Integrase catalytic region in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1959Integrase catalytic region (647 aa)    
Predicted Functional Partners:
Mettu_1960
TniB family protein (323 aa)
 
          0.981
Mettu_1961
Putative uncharacterized protein (614 aa)
 
          0.965
Mettu_1980
TniB family protein (324 aa)
 
          0.875
Mettu_1978
TnsA endonuclease (240 aa)
 
          0.864
Mettu_1984
Putative uncharacterized protein (602 aa)
 
          0.794
Mettu_3513
Polysaccharide biosynthesis protein (439 aa)
   
          0.696
Mettu_1958
Putative uncharacterized protein (81 aa)
              0.647
Mettu_2111
AAA ATPase (387 aa)
   
          0.615
Mettu_1184
Putative uncharacterized protein (759 aa)
   
          0.517
Mettu_2113
DNA sulfur modification protein DndD (678 aa)
   
          0.516
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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