• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_1961 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1961" - KEGG: pst:PSPTO_0030 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1961KEGG- pst-PSPTO_0030 hypothetical protein (614 aa)    
Predicted Functional Partners:
Mettu_1960
KEGG- bgf-BC1003_0018 TniB family protein; PFAM- Bacterial TniB; SMART- ATPase, AAA+ type, core (323 aa)
 
          0.964
Mettu_1959
PFAM- Integrase, catalytic core; Transposase-like, Mu, C-terminal; KEGG- bgf-BC1003_0017 integrase catalytic region (647 aa)
 
          0.957
Mettu_1978
PFAM- TnsA endonuclease, N-terminal; KEGG- bgf-BC1003_0016 hypothetical protein (240 aa)
 
          0.792
Mettu_1981
KEGG- bgf-BC1003_0019 hypothetical protein (259 aa)
   
          0.784
Mettu_1980
TniB family protein; PFAM- Bacterial TniB; KEGG- bgf-BC1003_0018 TniB family protein (324 aa)
 
          0.783
Mettu_2111
SMART- ATPase, AAA+ type, core; KEGG- bac-BamMC406_0007 AAA ATPase (387 aa)
   
          0.779
Mettu_3462
KEGG- hypothetical protein (666 aa)
   
          0.777
Mettu_3805
PFAM- Zonular occludens toxin; KEGG- rpi-Rpic_4349 zonular occludens toxin (372 aa)
   
          0.751
Mettu_3589
KEGG- mca-MCA1811 hypothetical protein (426 aa)
   
          0.750
Mettu_3945
KEGG- sli-Slin_1472 ATPase-like protein (350 aa)
   
          0.747
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (6%) [HD]