STRINGSTRING
Mettu_1990 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_1990" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_1990Putative uncharacterized protein (365 aa)    
Predicted Functional Partners:
Mettu_1989
N-6 DNA methylase (789 aa)
            0.971
Mettu_1991
Restriction modification system DNA specificity domain protein (435 aa)
              0.918
Mettu_1992
Restriction endonuclease, type I, EcoRI, R subunit/Type III (1010 aa)
              0.906
Mettu_0129
Type I site-specific deoxyribonuclease, HsdR family (1032 aa)
 
          0.573
Mettu_0127
Restriction modification system protein containing a DNA specificity domain (394 aa)
 
          0.521
Mettu_2503
Restriction modification system protein containing a DNA specificity domain (615 aa)
              0.493
Mettu_2500
Type I site-specific deoxyribonuclease (783 aa)
              0.493
Mettu_1943
Type I site-specific deoxyribonuclease (824 aa)
              0.493
Mettu_2501
Site-specific DNA-methyltransferase (Adenine-specific) (594 aa)
              0.463
Mettu_1948
Nucleotidyltransferase substrate binding protein, HI0074 family (623 aa)
              0.463
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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