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apaG protein (Methylobacter tundripaludum) - STRING interaction network
"apaG" - KEGG: tgr:Tgr7_2722 ApaG domain protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apaGKEGG- tgr-Tgr7_2722 ApaG domain protein; HAMAP- Protein ApaG; PFAM- ApaG (125 aa)    
Predicted Functional Partners:
apaH
Bis(5’-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5’,5’’’-P1,P4-tetraphosphate to yield ADP (281 aa)
   
 
  0.907
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (282 aa)
   
   
  0.821
Mettu_3387
TIGRFAM- Serine O-acetyltransferase; KEGG- mca-MCA1830 serine acetyltransferase; PFAM- Bacterial transferase hexapeptide repeat (263 aa)
     
 
    0.732
Mettu_0028
KEGG- mca-MCA2611 serine acetyltransferase; TIGRFAM- Serine O-acetyltransferase (255 aa)
     
 
    0.732
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) (329 aa)
   
   
  0.668
Mettu_2000
PFAM- Ankyrin repeat; KEGG- spu-593370 similar to ankyrin 2,3/unc44 (180 aa)
       
    0.620
mpl
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate; Belongs to the MurCDEF family. Mpl subfamily (450 aa)
              0.574
Mettu_2153
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (513 aa)
       
 
  0.464
Mettu_2274
KEGG- mfa-Mfla_0615 serine O-acetyltransferase (311 aa)
     
 
    0.454
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (338 aa)
              0.435
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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