STRINGSTRING
Mettu_2090 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2090" - Putative uncharacterized protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2090Putative uncharacterized protein (403 aa)    
Predicted Functional Partners:
Mettu_2091
Magnesium and cobalt transport protein CorA (329 aa)
              0.829
Mettu_0624
Putative uncharacterized protein (362 aa)
   
          0.777
Mettu_3263
Putative uncharacterized protein (454 aa)
   
          0.776
Mettu_2103
Putative uncharacterized protein (458 aa)
   
          0.776
Mettu_2293
Putative uncharacterized protein (292 aa)
   
          0.733
Mettu_4158
Amidohydrolase (413 aa)
   
          0.709
Mettu_1018
Putative lipoprotein (181 aa)
   
          0.709
Mettu_3962
Putative uncharacterized protein (384 aa)
   
          0.671
Mettu_3583
Lytic transglycosylase catalytic (366 aa)
   
          0.645
Mettu_2089
Putative uncharacterized protein (124 aa)
              0.578
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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