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Mettu_2104 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2104" - KEGG: sfu:Sfum_3573 hypothetical protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2104KEGG- sfu-Sfum_3573 hypothetical protein (301 aa)    
Predicted Functional Partners:
Mettu_2103
PFAM- Protein of unknown function DUF1597; KEGG- nmu-Nmul_A0439 hypothetical protein (458 aa)
              0.528
Mettu_2106
Two component transcriptional regulator, winged helix family; KEGG- mca-MCA2213 DNA binding response regulator KdpE; PFAM- Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART- Signal transduction response regulator, receiver region (233 aa)
              0.404
Mettu_2105
KEGG- mca-MCA2214 sensor histidine kinase KdpD; PFAM- Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART- ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region (914 aa)
              0.404
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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