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Mettu_2108 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2108" - Post-segregation antitoxin CcdA in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2108Post-segregation antitoxin CcdA (82 aa)    
Predicted Functional Partners:
Mettu_2107
CcdB protein (104 aa)
 
          0.973
Mettu_1385
CcdB-like toxin protein (90 aa)
   
          0.778
Mettu_1384
Post-segregation antitoxin CcdA (79 aa)
   
          0.778
Mettu_0648
Rubredoxin-type Fe(Cys)4 protein (237 aa)
   
          0.651
Mettu_2113
DNA sulfur modification protein DndD (678 aa)
 
          0.502
Mettu_3761
Glycosyl transferase family 39 (540 aa)
   
          0.499
Mettu_2115
Phosphoadenosine phosphosulfate reductase (382 aa)
 
          0.492
Mettu_2110
Putative uncharacterized protein (296 aa)
              0.479
Mettu_2111
AAA ATPase (387 aa)
              0.451
Mettu_2114
Putative uncharacterized protein (64 aa)
              0.424
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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