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Mettu_2118 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2118" - Invasion gene expression up-regulator SirB in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2118Invasion gene expression up-regulator SirB (120 aa)    
Predicted Functional Partners:
thrB
Homoserine kinase (322 aa)
              0.859
Mettu_2116
Putative uncharacterized protein (114 aa)
              0.824
Mettu_2584
Cytochrome c-type biogenesis protein CcmI (436 aa)
   
          0.615
Mettu_1359
MshA biogenesis protein MshI-1 (321 aa)
   
          0.588
Mettu_1361
Putative uncharacterized protein (211 aa)
   
          0.576
Mettu_2575
Heme exporter protein B ; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (224 aa)
   
          0.532
Mettu_1363
Type II and III secretion system protein (554 aa)
   
          0.509
Mettu_2183
Cytochrome c class I (220 aa)
   
          0.491
Mettu_2264
Putative cytochrome c4 (197 aa)
   
          0.458
Mettu_0170
Cytochrome c class I (188 aa)
   
          0.453
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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