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Mettu_2120 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2120" - Secretion protein HlyD family protein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2120Secretion protein HlyD family protein (408 aa)    
Predicted Functional Partners:
Mettu_2945
Drug resistance transporter, EmrB/QacA subfamily (549 aa)
   
  0.975
Mettu_3934
Drug resistance transporter, EmrB/QacA subfamily (521 aa)
   
  0.974
Mettu_1459
Major facilitator superfamily MFS_1 (513 aa)
   
  0.973
Mettu_2121
RND efflux system, outer membrane lipoprotein, NodT family (512 aa)
 
  0.961
Mettu_2122
Drug resistance transporter, EmrB/QacA subfamily (531 aa)
          0.923
Mettu_4063
Type I secretion outer membrane protein, TolC family (449 aa)
   
 
  0.899
Mettu_1453
Type I secretion outer membrane protein, TolC family (451 aa)
   
 
  0.899
Mettu_2944
RND efflux system, outer membrane lipoprotein, NodT family (489 aa)
 
  0.874
Mettu_3718
RND efflux system, outer membrane lipoprotein, NodT family (471 aa)
 
  0.767
Mettu_2242
RND efflux system, outer membrane lipoprotein, NodT family (492 aa)
 
  0.766
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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