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Mettu_2190 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2190" - TIGRFAM: Competence protein ComEA, helix-hairpin-helix region in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2190TIGRFAM- Competence protein ComEA, helix-hairpin-helix region; KEGG- tcx-Tcr_1673 competence protein ComEA helix-hairpin-helix region (112 aa)    
Predicted Functional Partners:
Mettu_3001
KEGG- mca-MCA2627 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM- Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM- ComEC/Rec2-related protein (777 aa)
 
   
  0.801
Mettu_3239
PFAM- Cytochrome d1, haem region; Cytochrome c, class I; KEGG- rme-Rmet_3331 cytochrome d1, heme region (526 aa)
     
  0.703
Mettu_0222
KEGG- mes-Meso_2793 cytochrome c, class I (380 aa)
     
  0.702
Mettu_0259
PFAM- Cytochrome c oxidase subunit II C-terminal; KEGG- nmu-Nmul_A0460 cytochrome c oxidase, subunit II (348 aa)
       
  0.700
Mettu_0221
KEGG- smd-Smed_4760 cytochrome c oxidase subunit II; TIGRFAM- Cytochrome c oxidase, subunit II; PFAM- Cytochrome c oxidase subunit II C-terminal; Cytochrome c, class I (326 aa)
       
  0.700
Mettu_0140
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (384 aa)
       
  0.700
Mettu_4062
KEGG- noc-Noc_1898 hypothetical protein (595 aa)
       
  0.697
Mettu_3241
KEGG- cti-RALTA_B2050 C-type cytochrome c55X precursor (101 aa)
       
  0.697
Mettu_3043
Cytochrome c(L), periplasmic; KEGG- mca-MCA0781 cytochrome c family protein; TIGRFAM- cytochrome c(L), periplasmic; PFAM- Cytochrome c, class I (158 aa)
       
  0.697
Mettu_1218
annotation not available (112 aa)
       
  0.697
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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